المؤلفون: Dard-Dascot, Cloelia, Naquin, Delphine, d'Aubenton-Carafa, Yves, Alix, Karine, Thermes, Claude, van Dijk, Erwin

المساهمون: Institut de Biologie Intégrative de la Cellule, Institut National de la Recherche Agronomique (INRA)-Université Paris-Sud - Paris 11 (UP11)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Centre National de la Recherche Scientifique (CNRS), Génétique Quantitative et Evolution - Le Moulon (Génétique Végétale) (GQE-Le Moulon), Institut National de la Recherche Agronomique (INRA)-Université Paris-Sud - Paris 11 (UP11)-AgroParisTech-Centre National de la Recherche Scientifique (CNRS), National Center for Scientific Research (CNRS), French Alternative Energies and Atomic Energy Commission (CEA), Paris-Sud University

المصدر: ISSN: 1471-2164 ; BMC Genomics ; https://hal.inrae.fr/hal-02621630Test ; BMC Genomics, 2018, 19, pp.1-16. ⟨10.1186/s12864-018-4491-6⟩.

مصطلحات موضوعية: Small RNA, Bias, Library preparation, Next-generation sequencing, NGS, 2 '-O-methyl RNA, [SDV]Life Sciences [q-bio]

العلاقة: info:eu-repo/semantics/altIdentifier/pmid/29402217; hal-02621630; https://hal.inrae.fr/hal-02621630Test; https://hal.inrae.fr/hal-02621630/documentTest; https://hal.inrae.fr/hal-02621630/file/2018_Dard-Dascot_BMC%20Genomics_1.pdfTest; PRODINRA: 425369; PUBMED: 29402217; WOS: 000424154400001

الإتاحة: https://doi.org/10.1186/s12864-018-4491-6Test
https://hal.inrae.fr/hal-02621630Test
https://hal.inrae.fr/hal-02621630/documentTest
https://hal.inrae.fr/hal-02621630/file/2018_Dard-Dascot_BMC%20Genomics_1.pdfTest

المؤلفون: Budowle, Bruce, Connell, Nancy D., Bielecka-Oder, Anna, Colwell, Rita R., Corbett, Cindi R, Fletcher, Jacqueline, Forsman, Mats, Kadavy, Dana R, Markotic, Alemka, Morse, Stephen A, Murch, Randall S, Sajantila, Antti, Schemes, Sarah E, Ternus, Krista L, Turner, Stephen D, Minot, Samuel

المساهمون: Hjelt Institute (-2014), Forensic Medicine, PaleOmics Laboratory

مصطلحات موضوعية: 319 Forensic science and other medical sciences, microbial forensics, validation, high throughput sequencing, sample preparation, library preparation, bioinformatics

وصف الملف: application/pdf

العلاقة: Budowle , B , Connell , N D , Bielecka-Oder , A , Colwell , R R , Corbett , C R , Fletcher , J , Forsman , M , Kadavy , D R , Markotic , A , Morse , S A , Murch , R S , Sajantila , A , Schemes , S E , Ternus , K L , Turner , S D & Minot , S 2014 , ' Validation of high throughput sequencing and microbial forensics applications ' , Investigative genetics , vol. 5 , no. 9 . https://doi.org/10.1186/2041-2223-5-9Test; 84904841142; 1e12cd48-46fe-4db7-81e7-8783d4860bd3; http://hdl.handle.net/10138/162123Test

الإتاحة: http://hdl.handle.net/10138/162123Test

المؤلفون: Albin Sandelin, Maxim Ivanov, Sebastian Marquardt

المصدر: BMC Bioinformatics
BMC Bioinformatics, Vol 22, Iss 1, Pp 1-15 (2021)
Ivanov, M, Sandelin, A & Marquardt, S 2021, ' TrancriptomeReconstructoR : data-driven annotation of complex transcriptomes ', BMC Bioinformatics, vol. 22, 290 . https://doi.org/10.1186/s12859-021-04208-2Test

مصطلحات موضوعية: 0106 biological sciences, Gene model, Computer science, QH301-705.5, Library preparation, Computer applications to medicine. Medical informatics, R858-859.7, Computational biology, 01 natural sciences, Biochemistry, Set (abstract data type), Transcriptome, Bioconductor, 03 medical and health sciences, Annotation, Structural Biology, Biology (General), Molecular Biology, Gene, 030304 developmental biology, Whole genome sequencing, 0303 health sciences, Applied Mathematics, Research, Gene Annotation, Pipeline (software), Computer Science Applications, genomic DNA, ComputingMethodologies_PATTERNRECOGNITION, RNA splicing, DNA microarray, 010606 plant biology & botany

وصف الملف: application/pdf

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e0f6291cf31c7f7ec998073dbffc1651Test
http://europepmc.org/articles/PMC8166035Test

المؤلفون: Sriharsa Pradhan, Paloma Cejas, Henry W. Long, Hang Gyeong Chin, Pierre-Olivier Estève, Zhiyi Sun, George Spracklin, Pengying Hao, Shuang-yong Xu, Udayakumar S. Vishnu

المصدر: Clinical Epigenetics

مصطلحات موضوعية: 0301 basic medicine, Tissue Fixation, Formalin fixed paraffin embedded, T-Lymphocytes, Library preparation, Gene Expression, High resolution, Computational biology, Signal-To-Noise Ratio, Kidney, Fixatives, Mice, 03 medical and health sciences, chemistry.chemical_compound, 0302 clinical medicine, Formaldehyde, Gene expression, Genetics, Animals, Humans, Molecular Biology, Genetics (clinical), Paraffin Embedding, Staining and Labeling, Gene Expression Profiling, Methodology, Computational Biology, High-Throughput Nucleotide Sequencing, Kidney metabolism, HCT116 Cells, DNA extraction, Chromatin, 030104 developmental biology, chemistry, Deoxycytosine Nucleotides, 030217 neurology & neurosurgery, DNA, Developmental Biology

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::803aad8432ac3a26fe2d060083997e31Test
http://europepmc.org/articles/PMC7507628Test

المؤلفون: Yuxiao Chang, Sheng Zhao, Wen Yao, Cuicui Zhang, Hui Zhang, Jianqiang Mu, Xinhua Ding, Junqiang Ding

المصدر: Plant Methods
Plant Methods, Vol 16, Iss 1, Pp 1-14 (2020)

مصطلحات موضوعية: 0106 biological sciences, 0301 basic medicine, Library preparation, Computer science, Sample (material), RNA-Seq, Plant Science, Computational biology, lcsh:Plant culture, 01 natural sciences, DNA sequencing, Chromosome conformation capture, 03 medical and health sciences, Genetics, lcsh:SB1-1110, Throughput (business), lcsh:QH301-705.5, Population genetic research, Whole genome sequencing, Massive parallel sequencing, Methodology, All-in-one sequencing (AIO-seq), 030104 developmental biology, lcsh:Biology (General), RNA-seq, 010606 plant biology & botany, Biotechnology

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bfe5a821cf2840d3d0237037cd435507Test
http://europepmc.org/articles/PMC7247233Test

المؤلفون: Benshang Li, Diane Flasch, Yongjin Li, John Easton, Scott Newman, Liqing Tian, Shawn Levy, Joy Nakitandwe, Heather L. Mulder, Yu Liu, Sheila A. Shurtleff, Shuhong Shen, Leslie L. Robison, Ying Shao, Xiaotu Ma, Zhaoming Wang, Jinghui Zhang, Xiang Chen, Michael N. Edmonson

المصدر: Genome Biology
Genome Biology, Vol 20, Iss 1, Pp 1-15 (2019)

مصطلحات موضوعية: Quality Control, lcsh:QH426-470, Deep sequencing, Library preparation, In silico, Word error rate, Nucleotide substitution, Computational biology, Biology, Polymerase Chain Reaction, DNA sequencing, 03 medical and health sciences, 0302 clinical medicine, Neoplasms, Humans, lcsh:QH301-705.5, 030304 developmental biology, Sample handling, 0303 health sciences, Research, Genetic variants, High-Throughput Nucleotide Sequencing, Hotspot mutation, Sequence Analysis, DNA, Subclonal, lcsh:Genetics, Detection, lcsh:Biology (General), Case-Control Studies, Mutation, Error rate, Substitution, 030217 neurology & neurosurgery, Software

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ffedc44bd94c86d80dcef45d103fde6bTest
http://europepmc.org/articles/PMC6417284Test

المؤلفون: Kumar, Ashwini, Kankainen, Matti, Parsons, Alun, Kallioniemi, Olli, Mattila, Pirkko, Heckman, Caroline A.

مصطلحات موضوعية: RNA-sequencing, Hematological malignancies, Library preparation, Ribo-depletion, Poly-A selection

وصف الملف: application/pdf

العلاقة: BMC Genomics. 2017 Aug 17;18(1):629; http://hdl.handle.net/10138/213697Test

الإتاحة: http://hdl.handle.net/10138/213697Test

المؤلفون: Yong Gu, Louise Aigrain, Michael A. Quail

المصدر: BMC Genomics

مصطلحات موضوعية: 0301 basic medicine, Genetics, Massive parallel sequencing, Methodology Article, 2 base encoding, Illumina sequencing, High-Throughput Nucleotide Sequencing, Computational biology, Biology, Polymerase Chain Reaction, DNA sequencing, 03 medical and health sciences, DNA sequencer, 030104 developmental biology, Droplet digital PCR, Next generation sequencing, NGS, DNA library preparation, Genomic library, Digital polymerase chain reaction, ABI Solid Sequencing, Illumina dye sequencing, Biotechnology, Gene Library

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::77dd8e719dad14d98a9a976f33655f1cTest
http://europepmc.org/articles/PMC4906846Test

المؤلفون: Alicia Clum, Doina Ciobanu, Susannah G. Tringe, Tanja Woyke, Robert M. Bowers, Joanne Lim, Jan Fang Cheng, Hope Tice, Kanwar Singh, Chew Yee Ngan

المصدر: BMC Genomics
BMC genomics, vol 16, iss 1
Bowers, RM; Clum, A; Tice, H; Lim, J; Singh, K; Ciobanu, D; et al.(2015). Impact of library preparation protocols and template quantity on the metagenomic reconstruction of a mock microbial community. BMC Genomics, 16(1). doi: 10.1186/s12864-015-2063-6. Lawrence Berkeley National Laboratory: Retrieved from: http://www.escholarship.org/uc/item/5c0368x5Test

مصطلحات موضوعية: Bioinformatics, Genomics, Computational biology, Biology, Genome, Medical and Health Sciences, Contig Mapping, Information and Computing Sciences, Genetics, Genomic library, Biomass, Gene Library, Low biomass, Library preparation protocol, Base Composition, Bacteria, Shotgun sequencing, Methodology Article, Microbiota, Human Genome, DNA, Sequence Analysis, DNA, Biological Sciences, Archaea, Microbial population biology, Metagenomics, Low input, Metagenome, Microbiome, DNA microarray, Sequence Analysis, GC-content, Biotechnology

وصف الملف: application/pdf

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e3bfb1cab8bd8b8786ce5fd53c62f0edTest
http://europepmc.org/articles/PMC4619416Test

المؤلفون: Ernesto Picardi, Marina Mangiulli, Ivana Kurelac, Domenica D'Elia, Flavio Licciulli, Claudia Calabrese, Caterina Manzari, Elisabetta Sbisà, Sabino Liuni, Graziano Pesole, Flaviana Marzano, Anna Maria D'Erchia, Apollonia Tullo, Anna Maria Porcelli, Marcella Attimonelli, Anna Maria Paluscio, Mariano Francesco Caratozzolo, Giuseppe Gasparre

المساهمون: Claudia Calabrese, Marina Mangiulli, Caterina Manzari, Anna Paluscio, Mariano Caratozzolo, Flaviana Marzano, Ivana Kurelac, Anna D’Erchia, Domenica D’Elia, Flavio Licciulli, Sabino Liuni, Ernesto Picardi, Marcella Attimonelli, Giuseppe Gasparre, Anna Porcelli, Graziano Pesole, Elisabetta Sbisà, Apollonia Tullo

المصدر: BMC Genomics
BMC genomics 14 (2013). doi:10.1186/1471-2164-14-855
info:cnr-pdr/source/autori:Claudia Calabrese1+, Marina Mangiulli2+, Caterina Manzari2, Anna Maria Paluscio3, Mariano Francesco Caratozzolo3, Flaviana Marzano3, Ivana Kurelac1, Anna Maria D'Erchia2, Domenica D'Elia3, Flavio Licciulli3, Sabino Liuni3, Ernesto Picardi2, Marcella Attimonelli2, Giuseppe Gasparre1, Anna Maria Porcelli4, Graziano Pesole25, Elisabetta Sbisà3 and Apollonia Tullo3*/titolo:A platform independent RNA-Seq protocol for the detection of transcriptome complexity/doi:10.1186%2F1471-2164-14-855/rivista:BMC genomics/anno:2013/pagina_da:/pagina_a:/intervallo_pagine:/volume:14

مصطلحات موضوعية: RNA-Seq, Computational biology, Biology, Platform-independent RNA-seq, Transcriptome, Mice, Transcription (biology), Cell Line, Tumor, Genetics, Animals, Humans, NEXT GENERATION SEQUENCING, cDNA library preparation, Expressed Sequence Tags, Expressed sequence tag, cDNA library, Sequence Analysis, RNA, Methodology Article, Gene Expression Profiling, RNA, Chromosome Mapping, High-Throughput Nucleotide Sequencing, CDNA Library Construction, Molecular Sequence Annotation, RNA-seq, Whole Transcriptome Sequencing (RNA-Seq), Gene Expression Regulation, Heterografts, DNA microarray, Biotechnology

وصف الملف: ELETTRONICO

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::462993e6c713dd32a01b6820c23ed548Test
http://europepmc.org/articles/PMC4046740Test