نتائج البحث

1

Multiple roles of H2A.Z in regulating promoter chromatin architecture in human cells

المؤلفون: David J. Tremethick, Renae Domaschenz, Maxim Nekrasov, Sebastian Kurscheid, Daniel L. Vera, Lauren Cole, Jonathan H. Dennis

المصدر: Nature Communications, Vol 12, Iss 1, Pp 1-15 (2021)
Nature Communications

مصطلحات موضوعية: Epigenomics, 0301 basic medicine, Nucleosome organization, animal structures, Science, Gene Expression, General Physics and Astronomy, RNA polymerase II, Article, General Biochemistry, Genetics and Molecular Biology, Histones, 03 medical and health sciences, Chromatin analysis, 0302 clinical medicine, Cell Line, Tumor, Gene expression, Humans, Micrococcal Nuclease, Nucleosome, Promoter Regions, Genetic, Histone variants, Binding Sites, Multidisciplinary, biology, Chemistry, Promoter, General Chemistry, Chromatin, Nucleosomes, Cell biology, DNA binding site, 030104 developmental biology, Histone, embryonic structures, biology.protein, RNA Polymerase II, Transcription, 030217 neurology & neurosurgery, Transcription Factors

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d409f621b8938c1aba8a6d3bb2088f25Test
https://doaj.org/article/3dd420dcdf0c40f78d943734cd5023b8Test

2

Androgen and glucocorticoid receptor direct distinct transcriptional programs by receptor-specific and shared DNA binding sites

المؤلفون: Ho-Ryun Chung, Melissa Bothe, Christine Helsen, Stefanie Schöne, Isabel Mayayo-Peralta, Frank Claessens, Gözde Kibar, Wilbert Zwart, Sebastiaan H. Meijsing, Alisa Fuchs, Marina Kulik, Stefan Prekovic

المساهمون: Chemical Biology

المصدر: Nucleic Acids Research (London)
Nucleic Acids Research, 49(7), 3856-3875. Oxford University Press
Nucleic Acids Research

مصطلحات موضوعية: EXPRESSION, Biochemistry & Molecular Biology, CHROMATIN ACCESSIBILITY, AcademicSubjects/SCI00010, PROTEINS, Plasma protein binding, 03 medical and health sciences, Glucocorticoid receptor, Receptors, Glucocorticoid, 0302 clinical medicine, ENRICHMENT ANALYSIS, Cell Line, Tumor, JASPAR, Genetics, Humans, Binding site, Enhancer, Transcription factor, 030304 developmental biology, Regulation of gene expression, 0303 health sciences, Binding Sites, Science & Technology, biology, Chemistry, Gene regulation, Chromatin and Epigenetics, FACILITATE, ENGAGEMENT, DNA, Chromatin, Cell biology, DNA binding site, AGONIST, Histone, Gene Expression Regulation, Receptors, Androgen, biology.protein, UPDATE, Life Sciences & Biomedicine, 030217 neurology & neurosurgery, OPEN-ACCESS DATABASE, Protein Binding, Transcription Factors

وصف الملف: Print; application/pdf

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d9d215001037840b910034a571ae6befTest
http://www.scopus.com/inward/record.url?scp=85105688172&partnerID=8YFLogxKTest

3

MultiMAP: dimensionality reduction and integration of multimodal data

المؤلفون: Mika Sarkin Jain, Krzysztof Polanski, Cecilia Dominguez Conde, Xi Chen, Jongeun Park, Lira Mamanova, Andrew Knights, Rachel A. Botting, Emily Stephenson, Muzlifah Haniffa, Austen Lamacraft, Mirjana Efremova, Sarah A. Teichmann

المساهمون: Efremova, Mirjana [0000-0002-8107-9974], Apollo - University of Cambridge Repository

المصدر: Genome Biology, Vol 22, Iss 1, Pp 1-26 (2021)
Genome Biology

وصف الملف: application/pdf; application/zip; text/xml

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::92cfef8befd7b8164a81880905ff6847Test
https://doaj.org/article/dc71585380b14353bc70ba25b87a9a35Test

4

Lamina-associated polypeptide 2 alpha is required for intranuclear MRTF-A activity

المؤلفون: Maria Sokolova, Guido Posern, Salla Kyheröinen, Antti Pennanen, Ekaterina Sidorenko, Maria K. Vartiainen, Roland Foisner

المساهمون: Institute of Biotechnology, UniSport, Nuclear organization by actin

المصدر: Scientific Reports, Vol 12, Iss 1, Pp 1-19 (2022)

مصطلحات موضوعية: Cytoplasm, Transcription, Genetic, Science, NUCLEAR-ENVELOPE PROTEIN, CELL-PROLIFERATION, 03 medical and health sciences, Mice, LAP2-ALPHA, 0302 clinical medicine, Cell Movement, Gene expression, Coactivator, Serum response factor, Transcriptional regulation, Animals, SERUM RESPONSE FACTOR, Cytoskeleton, Transcription factor, 030304 developmental biology, MYOCARDIN FAMILY, Cell Nucleus, 0303 health sciences, Multidisciplinary, biology, Chemistry, Chromatin binding, ACTIN CYTOSKELETON, Membrane Proteins, GENE, Actins, Chromatin, Cell biology, DNA-Binding Proteins, TRANSCRIPTION FACTORS, Histone, DIFFERENTIATION, Gene Expression Regulation, biology.protein, NIH 3T3 Cells, Trans-Activators, Medicine, 1182 Biochemistry, cell and molecular biology, SRF, 030217 neurology & neurosurgery, Protein Binding

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5816ae43deb67c3bee876c6f1007f82cTest
http://hdl.handle.net/10138/355568Test

5

Biologically relevant transfer learning improves transcription factor binding prediction

المؤلفون: Wyeth W. Wasserman, Manu Saraswat, Sara Mostafavi, Oriol Fornes, Gherman Novakovsky

المصدر: Genome Biology, Vol 22, Iss 1, Pp 1-25 (2021)
Genome Biology

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::36df32a9fc33a7d78ade87e4466313bfTest
https://doaj.org/article/3c3e2405091049ee8ec5f617c0226192Test

6

Dinucleosome specificity and allosteric switch of the ISW1a ATP-dependent chromatin remodeler in transcription regulation

المؤلفون: Blaine Bartholomew, Swetansu K. Hota, Jim Persinger, Lola Olufemi, Saurabh K. Bhardwaj, Solomon G. Hailu, Soumyadipta Kundu, Sandipan Brahma

المصدر: Nature Communications, Vol 11, Iss 1, Pp 1-15 (2020)
Nature Communications

مصطلحات موضوعية: 0301 basic medicine, Saccharomyces cerevisiae Proteins, Xenopus, Science, Allosteric regulation, General Physics and Astronomy, Chromatin remodelling, Saccharomyces cerevisiae, General Biochemistry, Genetics and Molecular Biology, Article, Histones, 03 medical and health sciences, chemistry.chemical_compound, 0302 clinical medicine, Transcription (biology), Salmon, Histone H2A, Nucleosome, Animals, lcsh:Science, skin and connective tissue diseases, Histone Acetyltransferases, Adenosine Triphosphatases, Multidisciplinary, biology, Promoter, General Chemistry, Histone acetyltransferase, Chromatin Assembly and Disassembly, Cell biology, Chromatin, Nucleosomes, DNA-Binding Proteins, 030104 developmental biology, chemistry, Gene Expression Regulation, Enzyme mechanisms, biology.protein, lcsh:Q, sense organs, 030217 neurology & neurosurgery, DNA, Transcription Factors

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f332c1a0b36fbdba9bc637c5a226d58bTest
https://doaj.org/article/3925090b229e433189477ec58c630f47Test

7

Navigating the crowd: visualizing coordination between genome dynamics, structure, and transcription

المؤلفون: Kerstin Bystricky, Haitham A. Shaban, Roman Barth

المصدر: Genome Biology, Vol 21, Iss 1, Pp 1-18 (2020)
Genome Biology (Online), 21(1)
Genome Biology

مصطلحات موضوعية: chromosome dynamics, rna-polymerase-ii, Quantitative imaging, dna-sequences, Transcription, Genetic, lcsh:QH426-470, estrogen-receptor-alpha, Review, Computational biology, Biology, spatial-organization, in-vivo, Chromosomes, single-molecule dynamics, 03 medical and health sciences, 0302 clinical medicine, Transcription (biology), Gene, Transcription factor, lcsh:QH301-705.5, 030304 developmental biology, Chromatin Fiber, Cell Nucleus, 0303 health sciences, Genome, Optical Imaging, phase-separation, Chromatin, Visualization, lcsh:Genetics, Eukaryotic Cells, lcsh:Biology (General), reveals transcription, Genome dynamics, chromatin dynamics, 030217 neurology & neurosurgery, Transcription Factors

وصف الملف: application/pdf

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9d246d83ee8d06683887fb94581f9895Test
http://link.springer.com/article/10.1186/s13059-020-02185-yTest

8

Chromatin accessibility landscape and regulatory network of high-altitude hypoxia adaptation

المؤلفون: Xin Luo, Jingxue Xin, Xuebin Qi, Zhanying Feng, Hui Zhang, Qiuyue Yuan, Wing Hung Wong, Yaoxi He, Lang Chen, Zhana Duren, Caijuan Bai, Yong Wang, Chaoyu Zhang, Ouzhuluobu, Dong Sheng Yan, Xiang Zhu, Chaoying Cui, Bing Su

المصدر: Nature Communications, Vol 11, Iss 1, Pp 1-20 (2020)
Nature Communications

مصطلحات موضوعية: 0301 basic medicine, Acclimatization, Gene regulatory network, General Physics and Astronomy, Evolutionary biology, RNA-Seq, Altitude Sickness, Tibet, 0302 clinical medicine, Pregnancy, Basic Helix-Loop-Helix Transcription Factors, Ethnicity, Gene Regulatory Networks, Regulatory Elements, Transcriptional, Hypoxia, lcsh:Science, Cells, Cultured, Disease Resistance, Regulation of gene expression, Multidisciplinary, Natural selection, Altitude, EPAS1, Genomics, Chromatin, Cell Hypoxia, Chromatin Immunoprecipitation Sequencing, Data integration, Female, Cell type, Science, Primary Cell Culture, Computational biology, Biology, Polymorphism, Single Nucleotide, Article, General Biochemistry, Genetics and Molecular Biology, 03 medical and health sciences, Human Umbilical Vein Endothelial Cells, Humans, Selection, Genetic, Gene, Models, Genetic, Whole Genome Sequencing, General Chemistry, Gene regulation, Oxygen, 030104 developmental biology, Gene Expression Regulation, lcsh:Q, 030217 neurology & neurosurgery, Transcription Factors

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::255ea5450018e6f12560dff3b50e27a8Test
https://doaj.org/article/5d727e2e509d4204b777b2789c0541c6Test

9

Alignment and quantification of ChIP-exo crosslinking patterns reveal the spatial organization of protein–DNA complexes

المؤلفون: B. Franklin Pugh, Shaun Mahony, Naomi Yamada, Nina Farrell, Matthew J. Rossi

المصدر: Nucleic Acids Research

مصطلحات موضوعية: Exonucleases, AcademicSubjects/SCI00010, NAR Breakthrough Article, RNA polymerase II, chemistry.chemical_compound, 0302 clinical medicine, RNA, Transfer, Transcription Factor TFIIIB, Databases, Genetic, Promoter Regions, Genetic, ChIP-exo, Narese/7, 0303 health sciences, biology, Chemistry, DNA-Binding Proteins, Narese/24, Regulatory sequence, Transfer RNA, Drosophila, RNA Polymerase II, Transcription Initiation Site, Algorithms, Protein Binding, Exonuclease, Ribosomal Proteins, Chromatin Immunoprecipitation, Saccharomyces cerevisiae Proteins, DNA polymerase II, Computational biology, macromolecular substances, Saccharomyces cerevisiae, 03 medical and health sciences, Narese/16, Transcription Factors, TFIII, Genetics, Animals, Computer Simulation, Gene, 030304 developmental biology, Binding Sites, technology, industry, and agriculture, RNA Polymerase III, Sequence Analysis, DNA, biology.protein, Chromatin immunoprecipitation, Sequence Alignment, 030217 neurology & neurosurgery, DNA, Transcription Factors

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::519db7b5f7e6c861ebff3eb370d4c873Test
http://europepmc.org/articles/PMC7672471Test

10

Genome-wide chromatin accessibility analyses provide a map for enhancing optic nerve regeneration

المؤلفون: Guoyan Zhao, Valeria Cavalli, Wolfgang Pita-Thomas, Ajeet Kumar, Tassia Mangetti Gonçalves

المصدر: Scientific Reports, Vol 11, Iss 1, Pp 1-17 (2021)
Scientific Reports

مصطلحات موضوعية: Retinal Ganglion Cells, 0301 basic medicine, genetic structures, Science, Gene Expression, Biology, CREB, Retinal ganglion, Article, Mice, 03 medical and health sciences, Transactivation, 0302 clinical medicine, medicine, Animals, Epigenetics in the nervous system, Axon, Regeneration and repair in the nervous system, Transcription factor, Multidisciplinary, Regeneration (biology), Optic Nerve, CREB-Binding Protein, Axons, Chromatin, eye diseases, Nerve Regeneration, Rats, Cell biology, 030104 developmental biology, medicine.anatomical_structure, nervous system, CTCF, Optic Nerve Injuries, biology.protein, Medicine, sense organs, 030217 neurology & neurosurgery, Transcription Factors

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8521162ee393813e997107edd40c2f72Test
https://doaj.org/article/3c37702a6f1543b5968d79e033cbdc1bTest

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