المؤلفون: Joy Barrett, Theyjasvi Ashok, Brian R. Morton, Antonina Kalkus

المصدر: PLoS Computational Biology
PLoS Computational Biology, Vol 17, Iss 10, p e1009535 (2021)
PLoS Computational Biology, Vol 17, Iss 10 (2021)

مصطلحات موضوعية: Evolutionary Genetics, Chloroplasts, Plant Science, Biochemistry, Intergenic region, Biochemical Simulations, Biology (General), Codon Usage, Flowering Plants, Conserved Sequence, Genetics, Ecology, food and beverages, Eukaryota, Genomics, Plants, Computational Theory and Mathematics, Chloroplast DNA, Modeling and Simulation, Codon usage bias, Cellular Structures and Organelles, Cellular Types, Research Article, Evolutionary Processes, Substitution Mutation, QH301-705.5, Plant Cell Biology, Biology, Evolution, Molecular, Cellular and Molecular Neuroscience, Magnoliopsida, Evolutionary Adaptation, Plant Cells, Plastid, Molecular Biology, Gene, Ecology, Evolution, Behavior and Systematics, Evolutionary Biology, Models, Genetic, Human evolutionary genetics, Point mutation, fungi, Organisms, Biology and Life Sciences, Computational Biology, Photosystem II Protein Complex, Cell Biology, Sequence Analysis, DNA, Mutation, Sequence Alignment

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b74d9ef3912af815cfeec6cc99c0d33cTest
http://europepmc.org/articles/PMC8570520Test

المؤلفون: Réka Albert, Jen Sheen, Parul Maheshwari, Hao Du, Sarah M. Assmann

المصدر: PLoS Computational Biology, Vol 15, Iss 10, p e1007429 (2019)
PLoS Computational Biology

مصطلحات موضوعية: 0301 basic medicine, Adenosine Triphosphatase, Leaves, Arabidopsis, Plant Science, Biochemistry, chemistry.chemical_compound, 0302 clinical medicine, Plant Growth Regulators, Guard cell, Phosphoprotein Phosphatases, Biochemical Simulations, Biology (General), Abscisic acid, Plant Proteins, Ecology, biology, Chemistry, Plant Anatomy, Simulation and Modeling, Enzymes, Protein Phosphatase 2C, Computational Theory and Mathematics, Modeling and Simulation, Plant hormone, Cellular Types, Network Analysis, Research Article, Guard Cells, Cell signaling, Computer and Information Sciences, QH301-705.5, In silico, Plant Cell Biology, Phosphatase, Casein, chemistry.chemical_element, Calcium, Network Motifs, Research and Analysis Methods, 03 medical and health sciences, Cellular and Molecular Neuroscience, Plant Cells, Genetics, Computer Simulation, Calcium Signaling, Molecular Biology, Ecology, Evolution, Behavior and Systematics, Stomata, Models, Statistical, Arabidopsis Proteins, Phosphatases, Biology and Life Sciences, Proteins, Computational Biology, Cell Biology, Stem Anatomy, biology.organism_classification, Phosphoproteins, Cytosol, 030104 developmental biology, Plant Stomata, Biophysics, Enzymology, 030217 neurology & neurosurgery, Abscisic Acid

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::eb200aa41ae996b8fc71249d40a739deTest
https://doaj.org/article/9a90de541ced47eb82cc21a34a06032cTest

المؤلفون: Eric Behle, Adélaïde Raguin

المصدر: PLoS Computational Biology
PLoS Computational Biology, Vol 17, Iss 9, p e1009262 (2021)

مصطلحات موضوعية: Polymers, Glycobiology, Plant Science, Lignin, Biochemistry, chemistry.chemical_compound, Computational Chemistry, Cell Wall, Cellulases, Biology (General), Materials, Glucans, Molecular Structure, Ecology, biology, Organic Compounds, Monosaccharides, Enzyme structure, Enzymes, Chemistry, Corn stover, Macromolecules, Computational Theory and Mathematics, Modeling and Simulation, Physical Sciences, Cellular Structures and Organelles, Plant Cell Walls, Cellular Types, Crystallization, Research Article, QH301-705.5, Plant Cell Biology, Materials Science, Carbohydrates, Cellulase, Zea mays, Cellular and Molecular Neuroscience, Hydrolysis, Cell Walls, Polysaccharides, Plant Cells, Genetics, Hemicellulose, Physics - Biological Physics, Cellulose, Molecular Biology, Ecology, Evolution, Behavior and Systematics, Stochastic Processes, Organic Chemistry, Chemical Compounds, Biology and Life Sciences, Proteins, Substrate (chemistry), Cell Biology, Polymer Chemistry, Glucose, chemistry, Enzyme Structure, Enzymology, biology.protein, Biochemical engineering, Sugars

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1068027753bf9a72088f7d4634a9a73dTest
https://doi.org/10.1371/journal.pcbi.1009262Test

المؤلفون: Thomas H. Gillingwater, Fabio Lauria, Paola Bernabo, Toma Tebaldi, Ewout J N Groen, Gabriella Viero

المصدر: PLoS Computational Biology, Vol 14, Iss 8, p e1006169 (2018)
PLoS Computational Biology
PLOS computational biology (Online) 14 (2018). doi:10.1371/journal.pcbi.1006169
info:cnr-pdr/source/autori:Lauria F, Tebaldi T, Bernabò P, Groen E, Gillingwater T, Viero G/titolo:riboWaltz: Optimization of ribosome P-site positioning in ribosome profiling data/doi:10.1371%2Fjournal.pcbi.1006169/rivista:PLOS computational biology (Online)/anno:2018/pagina_da:/pagina_a:/intervallo_pagine:/volume:14
Lauria, F, Tebaldi, T, Bernabò, P, Groen, E, Gillingwater, T & Viero, G 2018, ' riboWaltz: optimization of ribosome P-site positioning in ribosome profiling data ', PLoS Computational Biology . https://doi.org/10.1371/journal.pcbi.1006169Test

مصطلحات موضوعية: 0301 basic medicine, Five prime untranslated region, Computer science, translation, Gene Expression, Plant Science, Ribosome, in-vivo, Biochemistry, open reading frames, genome-wide, Database and Informatics Methods, 0302 clinical medicine, Diagnostic analysis, ribosome footprints, Untranslated Regions, RIBO-seq, Nucleotide, Ribosome profiling, Plastids, Biology (General), chemistry.chemical_classification, 0303 health sciences, Ecology, Messenger RNA, Eukaryota, High-Throughput Nucleotide Sequencing, Translation (biology), protein-synthesis, dynamics, Nucleic acids, Computational Theory and Mathematics, messenger-rna, 5' Utr, Modeling and Simulation, P-site identification, Cellular Structures and Organelles, reveals, Sequence Analysis, Research Article, 3' Utr, Bioinformatics, QH301-705.5, Plant Cell Biology, Sequence alignment, Computational biology, Biology, Research and Analysis Methods, 03 medical and health sciences, Cellular and Molecular Neuroscience, R package, Eukaryotic translation, Genetics, P-site, RNA, Messenger, Molecular Biology, Ecology, Evolution, Behavior and Systematics, 030304 developmental biology, Translation Initiation, Fragment (computer graphics), Sequence Analysis, RNA, Organisms, Fungi, RNA, Biology and Life Sciences, Computational Biology, Cell Biology, Molecular biology, Yeast, initiation, 030104 developmental biology, chemistry, Protein Biosynthesis, Protein Translation, Ribosomes, Sequence Alignment, 030217 neurology & neurosurgery, Software

وصف الملف: application/pdf

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6aed88b4c8d5a29d52fba1f1c33395e4Test
https://doaj.org/article/6ccc1c495977416abb5aac9e8660825fTest

المؤلفون: Michael R. Blatt, Julian M. Hibberd, Nigel J. Burroughs, Ivan Jurić

المساهمون: Hibberd, Julian [0000-0003-0662-7958], Apollo - University of Cambridge Repository

المصدر: PLoS Computational Biology
PLoS Computational Biology, Vol 15, Iss 9, p e1007373 (2019)

مصطلحات موضوعية: 0301 basic medicine, Atmospheric Science, Chloroplasts, Plant Science, Photosynthetic efficiency, Biochemistry, chemistry.chemical_compound, 0302 clinical medicine, Biology (General), Photosynthesis, QA, 2. Zero hunger, Ecology, biology, Plant Biochemistry, Physics, food and beverages, Chloroplast, Chemistry, Computational Theory and Mathematics, Modeling and Simulation, Physical Sciences, C3 Photosynthesis, Carbon dioxide, C4 Photosynthesis, Cellular Structures and Organelles, Cellular Types, Elementary Particles, Research Article, Crops, Agricultural, Ecological Metrics, QH301-705.5, Plant Cell Biology, Ribulose-Bisphosphate Carboxylase, Materials Science, Material Properties, Atmospheric carbon cycle, Models, Biological, Permeability, QA76, Greenhouse Gases, 03 medical and health sciences, Cellular and Molecular Neuroscience, Plant Cells, Genetics, Environmental Chemistry, Ribulose-1,5-Bisphosphate Carboxylase Oxygenase, Computer Simulation, Particle Physics, Molecular Biology, Ecology, Evolution, Behavior and Systematics, C4 photosynthesis, Photons, QK, Ecology and Environmental Sciences, RuBisCO, Chemical Compounds, Biology and Life Sciences, Computational Biology, Assimilation (biology), Cell Biology, Carbon Dioxide, 15. Life on land, Carbon, Photosynthetic Efficiency, 030104 developmental biology, Agronomy, chemistry, 13. Climate action, Atmospheric Chemistry, Earth Sciences, biology.protein, Environmental science, 030217 neurology & neurosurgery

وصف الملف: application/pdf

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::59a6ff2082128b1959eaaa4e1a81b6acTest
https://doi.org/10.1371/journal.pcbi.1007373Test

المؤلفون: Natsumaro Kutsuna, Kenji Yoshimura, Takashi Miura, Hisako Takigawa-Imamura, Takumi Higaki, Kae Akita

المصدر: PLoS Computational Biology, Vol 12, Iss 4, p e1004833 (2016)
PLoS Computational Biology

مصطلحات موضوعية: 0301 basic medicine, Leaves, Fruit and Seed Anatomy, Arabidopsis, Plant Science, GTPase, Microtubules, Plant Epidermis, Signaling Molecules, Cell Signaling, Cell Wall, Morphogenesis, Pattern Formation, Cytoskeleton, lcsh:QH301-705.5, Plant Growth and Development, Ecology, Plant Anatomy, Plants, Cell biology, Computational Theory and Mathematics, Modeling and Simulation, Embryogenesis, Cellular Structures and Organelles, Plant Cell Walls, Cellular Types, Research Article, Signal Transduction, Cell signaling, Plant Cell Biology, Plant Development, Pattern formation, Biology, Models, Biological, Time-Lapse Imaging, Cell wall, 03 medical and health sciences, Cellular and Molecular Neuroscience, Cell Walls, GTP-binding protein regulators, Microscopy, Electron, Transmission, GTP-Binding Proteins, Microtubule, Plant Cells, Genetics, Molecular Biology, Ecology, Evolution, Behavior and Systematics, Body Patterning, Monomeric GTP-Binding Proteins, Plant Embryo Anatomy, Arabidopsis Proteins, Cotyledons (Botany), Organisms, Biology and Life Sciences, Computational Biology, Cell Biology, Plant Leaves, 030104 developmental biology, lcsh:Biology (General), Seedlings, Cytoplasm, Plant Embryogenesis, Developmental Biology

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f6196f4f035c493d1aa66307afd80204Test
https://doi.org/10.1371/journal.pcbi.1004833Test

المؤلفون: Quentin Thommen, Florence Corellou, François-Yves Bouget, Benjamin Pfeuty, Pierre-Emmanuel Morant, Marc Lefranc

المساهمون: Laboratoire de Physique des Lasers, Atomes et Molécules - UMR 8523 (PhLAM), Université de Lille-Centre National de la Recherche Scientifique (CNRS), Laboratoire d'Océanographie Microbienne (LOMIC), Centre National de la Recherche Scientifique (CNRS)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Observatoire océanologique de Banyuls (OOB), Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS), ANR-07-BSYS-0004,MINICLOCK,Modélisation de l'horloge circadienne dans un nouveau modèle biologique : l'Ostreococcus tauri(2007), Observatoire océanologique de Banyuls (OOB), Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)

المصدر: PLoS Computational Biology, Vol 6, Iss 11, p e1000990 (2010)
PLoS Computational Biology
PLoS Computational Biology, Public Library of Science, 2010, 6 (11), pp.e1000990. ⟨10.1371/journal.pcbi.1000990⟩
PLoS Computational Biology, 2010, 6 (11), pp.e1000990. ⟨10.1371/journal.pcbi.1000990⟩

مصطلحات موضوعية: Light, Molecular Networks (q-bio.MN), Circadian clock, Normal Distribution, Gene regulatory network, Quantitative Biology - Quantitative Methods, Ostreococcus tauri, Ostreococcus, 03 medical and health sciences, Cellular and Molecular Neuroscience, 0302 clinical medicine, Chlorophyta, Gene Expression Regulation, Plant, Diurnal cycle, Circadian Clocks, Genetics, Quantitative Biology - Molecular Networks, Gene Regulatory Networks, RNA, Messenger, Circadian rhythm, Molecular Biology, lcsh:QH301-705.5, Ecology, Evolution, Behavior and Systematics, Quantitative Methods (q-bio.QM), Oligonucleotide Array Sequence Analysis, 030304 developmental biology, Feedback, Physiological, 0303 health sciences, Computational Biology/Systems Biology, Ecology, biology, Circadian Rhythm Signaling Peptides and Proteins, Cell Biology/Plant Cell Biology, [SDV.BBM.MN]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Molecular Networks [q-bio.MN], Feedback loop, biology.organism_classification, [SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM], Computational Biology/Signaling Networks, CLOCK, Computational Theory and Mathematics, lcsh:Biology (General), Modeling and Simulation, FOS: Biological sciences, [INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM], Biological system, Algorithms, 030217 neurology & neurosurgery, Research Article

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1c8f12d1d0bf91907d377c32dc091cfaTest
http://europepmc.org/articles/PMC2978692?pdf=renderTest

المؤلفون: Przemyslaw Prusinkiewicz, Jennifer N. Bragg, Aaron Sluis, Devin O'Connor, Adam Runions, Sarah Hake, John P. Vogel

المصدر: PLoS Computational Biology, Vol 10, Iss 1, p e1003447 (2014)
PLoS Computational Biology

مصطلحات موضوعية: Arabidopsis, Plant Science, Gene Expression Regulation, Plant, Genes, Reporter, Gene Duplication, Molecular Cell Biology, Morphogenesis, Image Processing, Computer-Assisted, Arabidopsis thaliana, Pattern Formation, lcsh:QH301-705.5, Phylogeny, Plant Growth and Development, chemistry.chemical_classification, Ecology, biology, food and beverages, Genomics, Cell biology, Computational Theory and Mathematics, Modeling and Simulation, Brachypodium, Brachypodium distachyon, Algorithms, Research Article, Arabidopsis Thaliana, Plant Cell Biology, Meristem, Flowers, Poaceae, Zea mays, Molecular Genetics, Cellular and Molecular Neuroscience, Model Organisms, Plant and Algal Models, Xylem, Auxin, Botany, Genetics, Computer Simulation, Primordium, Biology, Molecular Biology, Ecology, Evolution, Behavior and Systematics, Evolutionary Biology, Indoleacetic Acids, Epidermis (botany), Evolutionary Developmental Biology, fungi, Computational Biology, Comparative Genomics, biology.organism_classification, Maize, Plant Leaves, lcsh:Biology (General), chemistry, Computer Science, Mathematics, Software, Developmental Biology

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6b9fb40f934c39eebd52580d6f2f653eTest
https://doi.org/10.1371/journal.pcbi.1003447Test