Survey of genome organization and gene content of Corynebacterium pseudotuberculosis

التفاصيل البيبلوغرافية
العنوان: Survey of genome organization and gene content of Corynebacterium pseudotuberculosis
المؤلفون: Anderson Miyoshi, Guilherme Oliveira, Vivian D'Afonseca, Luis G.C. Pacheco, Fernanda Alves Dorella, Sergio C. Oliveira, Elisângela Monteiro Coser, Francisco Prosdocimi, José Miguel Ortega, Santuza M. R. Teixeira, Luciana M. Oliveira, Roberto Meyer, Izabella A. Pena, Vasco Azevedo, Pablo M. R. O. Moraes
المصدر: Microbiological research. 165(4)
سنة النشر: 2008
مصطلحات موضوعية: Genetics, DNA, Bacterial, Base Sequence, Corynebacterium pseudotuberculosis, Molecular Sequence Data, Sequence Analysis, DNA, Biology, Genome, Microbiology, Genes, Bacterial, Proteome, Caseous lymphadenitis, Genomic library, Gene, Genome, Bacterial, Genomic organization, Synteny
الوصف: Corynebacterium pseudotuberculosis is an intracellular pathogen that causes Caseous lymphadenitis (CLA) disease in sheep and goats. The widespread occurrence and the economic importance of this pathogen have prompted investigation of its pathogenesis. We used a genomic library of C. pseudotuberculosis to generate 1440 genomic survey sequences (GSSs); these were analyzed in silico with bioinformatics tools, using public databases for comparative analyses. We employed non-redundant unique sequences as a query for BLAST searches against the genome, the translated genome and the proteome of four other Corynebacterium species that have been completely sequenced. We were able to characterize approximately 8% of the genome of C. pseudotuberculosis, including previously undescribed functional group genes, based on the COG database; the GSSs classification into categories gave 13% information storage and processing, 14% cellular processes and 23% metabolism. We found a close relation between C. pseudotuberculosis and C. diphtheriae conserved-gene synteny in Corynebacteria species.
تدمد: 1618-0623
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6d0a6b70a4fbf19766f0310c5c92c2d6Test
https://pubmed.ncbi.nlm.nih.gov/19720513Test
حقوق: OPEN
رقم الانضمام: edsair.doi.dedup.....6d0a6b70a4fbf19766f0310c5c92c2d6
قاعدة البيانات: OpenAIRE