Resonance Assignment and Three-Dimensional Structure Determination of a Human α-Defensin, HNP-1, by Solid-State NMR

التفاصيل البيبلوغرافية
العنوان: Resonance Assignment and Three-Dimensional Structure Determination of a Human α-Defensin, HNP-1, by Solid-State NMR
المؤلفون: Mei Hong, Tim Doherty, Cyril Barinka, Jing Li, Wuyuan Lu, Yuan Zhang, Jacek Lubkowski
المصدر: Journal of Molecular Biology. 397:408-422
بيانات النشر: Elsevier BV, 2010.
سنة النشر: 2010
مصطلحات موضوعية: Models, Molecular, alpha-Defensins, Protein Conformation, Chemistry, Protein Data Bank (RCSB PDB), Dihedral angle, Article, Alpha defensin, Protein Structure, Tertiary, Crystallography, Membrane, Protein structure, Solid-state nuclear magnetic resonance, Structural Biology, Humans, Lipid bilayer, Nuclear Magnetic Resonance, Biomolecular, Molecular Biology, Defensin
الوصف: Human alpha-defensins [human neutrophil peptides (HNPs)] are immune defense mini-proteins that act by disrupting microbial cell membranes. Elucidating the three-dimensional (3D) structures of HNPs in lipid membranes is important for understanding their mechanisms of action. Using solid-state NMR (SSNMR), we have determined the 3D structure of HNP-1 in a microcrystalline state outside the lipid membrane, which provides benchmarks for structure determination and comparison with the membrane-bound state. From a suite of two-dimensional and 3D magic-angle spinning experiments, (13)C and (15)N chemical shifts that yielded torsion angle constraints were obtained, while inter-residue distances were obtained to restrain the 3D fold. Together, these constraints led to the first high-resolution SSNMR structure of a human defensin. The SSNMR structure has close similarity to the crystal structures of the HNP family, with the exception of the loop region between the first and second beta-strands. The difference, which is partially validated by direct torsion angle measurements of selected loop residues, suggests possible conformational variation and flexibility of this segment of the protein, which may regulate HNP interaction with the phospholipid membrane of microbial cells.
تدمد: 0022-2836
الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a30657b07641af72b9ae49e67ece5a43Test
https://doi.org/10.1016/j.jmb.2010.01.030Test
حقوق: OPEN
رقم الانضمام: edsair.doi.dedup.....a30657b07641af72b9ae49e67ece5a43
قاعدة البيانات: OpenAIRE