دورية أكاديمية

Differentially Expressed Genes in Osteomyelitis Induced by Staphylococcus aureus Infection

التفاصيل البيبلوغرافية
العنوان: Differentially Expressed Genes in Osteomyelitis Induced by Staphylococcus aureus Infection
المؤلفون: Peisheng Chen, Zilong Yao, Ganming Deng, Yilong Hou, Siwei Chen, Yanjun Hu, Bin Yu
المصدر: Frontiers in Microbiology, Vol 9 (2018)
بيانات النشر: Frontiers Media S.A., 2018.
سنة النشر: 2018
المجموعة: LCC:Microbiology
مصطلحات موضوعية: osteomyelitis (OM), Staphylococcus aureus (S. aureus), candidate biomarkers, bioinformatic analysis, differentially expressed genes (DEGs), Microbiology, QR1-502
الوصف: Osteomyelitis (OM) is a complicated and serious disease and its underlying molecular signatures of disease initiation and progression remain unclear. Staphylococcus aureus (S. aureus) is the most common causative agent of OM. Previous study of Banchereau et al. has established a link between whole blood transcription profiles and clinical manifestations in patients infected with S. aureus. However, the differentially expressed genes (DEGs) in OM induced by S. aureus infection have not been intensively investigated. In this study, we downloaded the gene expression profile dataset GSE30119 from Gene Expression Omnibus, and performed bioinformatic analysis to identify DEGs in S. aureus infection induced OM from the transcriptional level. The study consisted of 143 whole blood samples, including 44 healthy controls, 42 OM-free, and 57 OM infection patients. A total of 209 S. aureus infection-related genes (SARGs) and 377 OM-related genes (OMRGs) were identified. The SARGs were primarily involved in the immune response by GO functional and pathway enrichment analysis. Several proteins adhere to neutrophil extracellular traps may be critical for the immune response to the process of S. aureus infection. By contrast, the OMRGs differ from the SARGs. The OMRGs were enriched in transmembrane signaling receptor and calcium channel activity, cilium morphogenesis, chromatin silencing, even multicellular organism development. Several key proteins, including PHLPP2 and EGF, were hub nodes in protein–protein interaction network of the OMRGs. In addition, alcoholism, systemic lupus erythematosus and proteoglycans in cancer were the top pathways influenced by the OMRGs associated with OM. Thus, this study has further explored the DEGs and their biological functions associated with S. aureus infection and OM, comparing with the previous study, and may light the further insight into the underlying molecular mechanisms and the potential critical biomarkers in OM development.
نوع الوثيقة: article
وصف الملف: electronic resource
اللغة: English
تدمد: 1664-302X
العلاقة: https://www.frontiersin.org/article/10.3389/fmicb.2018.01093/fullTest; https://doaj.org/toc/1664-302XTest
DOI: 10.3389/fmicb.2018.01093
الوصول الحر: https://doaj.org/article/ffe5fadb3f14418f866a2afa629b0752Test
رقم الانضمام: edsdoj.ffe5fadb3f14418f866a2afa629b0752
قاعدة البيانات: Directory of Open Access Journals
الوصف
تدمد:1664302X
DOI:10.3389/fmicb.2018.01093