دورية أكاديمية
The first mitogenomes of the superfamily Pamphilioidea (Hymenoptera: Symphyta): Mitogenome architecture and phylogenetic inference
| العنوان: | The first mitogenomes of the superfamily Pamphilioidea (Hymenoptera: Symphyta): Mitogenome architecture and phylogenetic inference |
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| المؤلفون: | Niu, Gengyun, Korkmaz, Ertan Mahir, Dogan, Ozgul, Zhang, Yaoyao, Aydemir, Merve Nur, Budak, Mahir, Du, Shiyu, Basibuyuk, Hasan Huseyin, Wei, Meicai |
| المساهمون: | Niu, Gengyun -- Wei, Meicai Jiangxi Normal Univ, Coll Life Sci, 99 Ziyang Rd, Nanchang 330022, Jiangxi, Peoples R China -- Korkmaz, Ertan Mahir -- Dogan, Ozgul -- Aydemir, Merve Nur -- Budak, Mahir Sivas Cumhuriyet Univ, Dept Mol Biol & Genet, Fac Sci, Sivas, Turkey -- Zhang, Yaoyao -- Du, Shiyu Cent South Univ Forestry & Technol, Key Lab Cultivat & Protect Nonwood Forest Trees, Minist Educ, 498 South Shaoshan Rd, Changsha 410004, Hunan, Peoples R China -- Basibuyuk, Hasan Huseyin Akdeniz Univ, Dept Gerontol, Fac Hlth Sci, Antalya, Turkey, Niu, Gengyun -- 0000-0003-0505-7180, Basibuyuk, Hasan Huseyin -- 0000-0001-6504-6139, DOGAN, Ozgul -- 0000-0003-0182-8654, Budak, Mahir -- 0000-0001-5610-486X, aydemir, merve nur -- 0000-0001-6328-626X, Korkmaz, Ertan Mahir -- 0000-0003-0699-1354 |
| بيانات النشر: | ELSEVIER SCIENCE BV |
| سنة النشر: | 2019 |
| المجموعة: | Sivas Cumhuriyet University Institutional Repository |
| مصطلحات موضوعية: | Gene rearrangement, Mitochondrial genome, Symphyta |
| الوصف: | WOS: 000456899300021 ; PubMed ID: 30448489 ; The Pamphilioidea represents a small superfamily of the phytophagous suborder Symphyta (Hymenoptera). Here, nearly complete mitochondrial genomes (mitogenomes) of three pamphilioid species: Chinolyda flagellicornis (Pamphiliidae), Megalodontes spiraeae and M. cephalotes (Megalodontesidae) were newly sequenced using next generation sequencing and comparatively analysed with the previously reported symphytan mitogenomes. A positive AT skew (0.013) and a negative GC skew (-0.194) were found in pamphilioid mitogenome, and a deviation from strand asymmetry was also observed in the PCGs encoded on both strands. Several gene rearrangement events were observed in four tRNA gene clusters (WCY, IQM, ARNS1EF and TP clusters), which have not been reported from symphytan mitogenomes to date. As the most parsimonious explanation, compared with the inferred insect ancestral mitogenome architecture, the occurrence of gene rearrangements in pamphilioid mitogenomes requires totally five evolutionary steps, including four transpositions and one inversion. The predicted secondary structures of tRNAs, rrnS and rrnL genes are mostly consistent with reported hymenopteran species. Phylogenetic analyses recovered the monophyly of superfamily Pamphilioidea and indicated the relationship Tenthredinoidea + (Pamphilioidea + (Cephoidea + (Orussoidea + Apocrita))) with strong nodal supports. (C) 2018 Elsevier B.V. All rights reserved. ; TUBITAK (The Scientific and Technological Research Council of Turkey) [112T418]; National Natural Science Foundation of China [31501885, 31672344] ; This study was financially supported by TUBITAK (The Scientific and Technological Research Council of Turkey, a research project with grant number 112T418) and National Natural Science Foundation of China (No. 31501885, 31672344). The members of Cumhuriyet University Molecular Systematics Research Group (CUMSAG) and Lab of Insect Systematics and Evolutionary Biology (LISEB) from Central South University of Forestry and ... |
| نوع الوثيقة: | article in journal/newspaper |
| اللغة: | English |
| تدمد: | 0141-8130 1879-0003 |
| العلاقة: | INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES; Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı; https://dx.doi.org/10.1016/j.ijbiomac.2018.11.129Test; https://hdl.handle.net/20.500.12418/5965Test; 124; 199; 185 |
| DOI: | 10.1016/j.ijbiomac.2018.11.129 |
| الإتاحة: | https://doi.org/20.500.12418/5965Test https://doi.org/10.1016/j.ijbiomac.2018.11.129Test https://hdl.handle.net/20.500.12418/5965Test |
| حقوق: | info:eu-repo/semantics/closedAccess |
| رقم الانضمام: | edsbas.4883C10F |
| قاعدة البيانات: | BASE |
| تدمد: | 01418130 18790003 |
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| DOI: | 10.1016/j.ijbiomac.2018.11.129 |