The evolving SARS-CoV-2 epidemic in Africa: Insights from rapidly expanding genomic surveillance

التفاصيل البيبلوغرافية
العنوان:	The evolving SARS-CoV-2 epidemic in Africa: Insights from rapidly expanding genomic surveillance
المؤلفون:	Tegally, Houriiyah, San, James E., Cotten, Matthew, Moir, Monika, Tegomoh, Bryan, Mboowa, Gerald, Martin, Darren P., Baxter, Cheryl, Lambisia, Arnold W., Diallo, Amadou, Amoako, Daniel G., Diagne, Moussa M., Sisay, Abay, Zekri, Abdel-Rahman N., Gueye, Abdou Salam, Sangare, Abdoul K., Ouedraogo, Abdoul-Salam, Sow, Abdourahmane, Musa, Abdualmoniem O., Sesay, Abdul K., Abias, Abe G., Elzagheid, Adam I., Lagare, Adamou, Kemi, Adedotun-Sulaiman, Abar, Aden Elmi, Johnson, Adeniji A., Fowotade, Adeola, Oluwapelumi, Adeyemi O., Amuri, Adrienne A., Juru, Agnes, Kandeil, Ahmed, Mostafa, Ahmed, Rebai, Ahmed, Sayed, Ahmed, Kazeem, Akano, Balde, Aladje, Christoffels, Alan, Trotter, Alexander J., Campbell, Allan, Keita, Alpha K., Kone, Amadou, Bouzid, Amal, Souissi, Amal, Agweyu, Ambrose, Naguib, Amel, Gutierrez, Ana V., Nkeshimana, Anatole, Page, Andrew J., Yadouleton, Anges, Vinze, Anika, Happi, Anise N., Chouikha, Anissa, Iranzadeh, Arash, Maharaj, Arisha, Batchi-Bouyou, Armel L., Ismail, Arshad, Sylverken, Augustina A., Goba, Augustine, Femi, Ayoade, Sijuwola, Ayotunde E., Marycelin, Baba, Salako, Babatunde L., Oderinde, Bamidele S., Bolajoko, Bankole, Diarra, Bassirou, Herring, Belinda L., Tsofa, Benjamin, Lekana-Douki, Bernard, Mvula, Bernard, Njanpop-Lafourcade, Berthe-Marie, Marondera, Blessing T., Khaireh, Bouh Abdi, Kouriba, Bourema, Adu, Bright, Pool, Brigitte, McInnis, Bronwyn, Brook, Cara, Williamson, Carolyn, Nduwimana, Cassien, Anscombe, Catherine, Pratt, Catherine B., Scheepers, Cathrine, Akoua-Koffi, Chantal G., Agoti, Charles N., Mapanguy, Chastel M., Loucoubar, Cheikh, Onwuamah, Chika K., Ihekweazu, Chikwe, Malaka, Christian N., Peyrefitte, Christophe, Grace, Chukwa, Omoruyi, Chukwuma E., Rafaï, Clotaire D., Morang’a, Collins M., Erameh, Cyril, Lule, Daniel B., Bridges, Daniel J., Mukadi-Bamuleka, Daniel, Park, Danny, Rasmussen, David A., Baker, David, Nokes, David J., Ssemwanga, Deogratius, Tshiabuila, Derek, Amuzu, Dominic S. Y., Goedhals, Dominique, Grant, Donald S., Omuoyo, Donwilliams O., Maruapula, Dorcas, Wanjohi, Dorcas W., Foster-Nyarko, Ebenezer, Lusamaki, Eddy K., Simulundu, Edgar, Ong’era, Edidah M., Ngabana, Edith N., Abworo, Edward O., Otieno, Edward, Shumba, Edwin, Barasa, Edwine, Ahmed, El Bara, Ahmed, Elhadi A., Lokilo, Emmanuel, Mukantwari, Enatha, Philomena, Eromon, Belarbi, Essia, Simon-Loriere, Etienne, Anoh, Etilé A., Manuel, Eusebio, Leendertz, Fabian, Taweh, Fahn M., Wasfi, Fares, Abdelmoula, Fatma, Takawira, Faustinos T., Derrar, Fawzi, Ajogbasile, Fehintola V., Treurnicht, Florette, Onikepe, Folarin, Ntoumi, Francine, Muyembe, Francisca M., Ragomzingba, Frank E. Z., Dratibi, Fred A., Iyanu, Fred-Akintunwa, Mbunsu, Gabriel K., Thilliez, Gaetan, Kay, Gemma L., Akpede, George O., van Zyl, Gert U., Awandare, Gordon A., Kpeli, Grace S., Schubert, Grit, Maphalala, Gugu P., Ranaivoson, Hafaliana C., Omunakwe, Hannah E., Onywera, Harris, Abe, Haruka, Karray, Hela, Nansumba, Hellen, Triki, Henda, Kadjo, Herve Albéric Adje, Elgahzaly, Hesham, Gumbo, Hlanai, Mathieu, Hota, Kavunga-Membo, Hugo, Smeti, Ibtihel, Olawoye, Idowu B., Adetifa, Ifedayo M. O., Odia, Ikponmwosa, Ben Boubaker, Ilhem Boutiba, Muhammad, Iluoreh Ahmed, Ssewanyana, Isaac, Wurie, Isatta, Konstantinus, Iyaloo S., Halatoko, Jacqueline Wemboo Afiwa, Ayei, James, Sonoo, Janaki, Makangara, Jean-Claude C., Tamfum, Jean-Jacques M., Heraud, Jean-Michel, Shaffer, Jeffrey G., Giandhari, Jennifer, Musyoki, Jennifer, Nkurunziza, Jerome, Uwanibe, Jessica N., Bhiman, Jinal N., Yasuda, Jiro, Morais, Joana, Kiconco, Jocelyn, Sandi, John D., Huddleston, John, Odoom, John K., Morobe, John M., Gyapong, John O., Kayiwa, John T., Okolie, Johnson C., Xavier, Joicymara S., Gyamfi, Jones, Wamala, Joseph F., Bonney, Joseph H. K., Nyandwi, Joseph, Everatt, Josie, Nakaseegu, Joweria, Ngoi, Joyce M., Namulondo, Joyce, Oguzie, Judith U., Andeko, Julia C., Lutwama, Julius J., Mogga, Juma J. H., O’Grady, Justin, Siddle, Katherine J., Victoir, Kathleen, Adeyemi, Kayode T., Tumedi, Kefentse A., Carvalho, Kevin S., Mohammed, Khadija Said, Dellagi, Koussay, Musonda, Kunda G., Duedu, Kwabena O., Fki-Berrajah, Lamia, Singh, Lavanya, Kepler, Lenora M., Biscornet, Leon, de Oliveira Martins, Leonardo, Chabuka, Lucious, Olubayo, Luicer, Ojok, Lul Deng, Deng, Lul Lojok, Ochola-Oyier, Lynette I., Tyers, Lynn, Mine, Madisa, Ramuth, Magalutcheemee, Mastouri, Maha, ElHefnawi, Mahmoud, Mbanne, Maimouna, Matsheka, Maitshwarelo I., Kebabonye, Malebogo, Diop, Mamadou, Momoh, Mambu, Lima Mendonça, Maria da Luz, Venter, Marietjie, Paye, Marietou F., Faye, Martin, Nyaga, Martin M., Mareka, Mathabo, Damaris, Matoke-Muhia, Mburu, Maureen W., Mpina, Maximillian G., Owusu, Michael, Wiley, Michael R., Tatfeng, Mirabeau Y., Ayekaba, Mitoha Ondo’o, Abouelhoda, Mohamed, Beloufa, Mohamed Amine, Seadawy, Mohamed G., Khalifa, Mohamed K., Matobo, Mooko Marethabile, Kane, Mouhamed, Salou, Mounerou, Mbulawa, Mphaphi B., Mwenda, Mulenga, Allam, Mushal, Phan, My V. T., Abid, Nabil, Rujeni, Nadine, Abuzaid, Nadir, Ismael, Nalia, Elguindy, Nancy, Top, Ndeye Marieme, Dia, Ndongo, Mabunda, Nédio, Hsiao, Nei-yuan, Silochi, Nelson Boricó, Francisco, Ngiambudulu M., Saasa, Ngonda, Bbosa, Nicholas, Murunga, Nickson, Gumede, Nicksy, Wolter, Nicole, Sitharam, Nikita, Ndodo, Nnaemeka, Ajayi, Nnennaya A., Tordo, Noël, Mbhele, Nokuzola, Razanajatovo, Norosoa H., Iguosadolo, Nosamiefan, Mba, Nwando, Kingsley, Ojide C., Sylvanus, Okogbenin, Femi, Oladiji, Adewumi, Olubusuyi M., Testimony, Olumade, Ogunsanya, Olusola A., Fakayode, Oluwatosin, Ogah, Onwe E., Oludayo, Ope-Ewe, Faye, Ousmane, Smith-Lawrence, Pamela, Ondoa, Pascale, Combe, Patrice, Nabisubi, Patricia, Semanda, Patrick, Oluniyi, Paul E., Arnaldo, Paulo, Quashie, Peter Kojo, Okokhere, Peter O., Bejon, Philip, Dussart, Philippe, Bester, Phillip A., Mbala, Placide K., Kaleebu, Pontiano, Abechi, Priscilla, El-Shesheny, Rabeh, Joseph, Rageema, Aziz, Ramy Karam, Essomba, René G., Ayivor-Djanie, Reuben, Njouom, Richard, Phillips, Richard O., Gorman, Richmond, Kingsley, Robert A., Neto Rodrigues, Rosa Maria D. E. S. A., Audu, Rosemary A., Carr, Rosina A. A., Gargouri, Saba, Masmoudi, Saber, Bootsma, Sacha, Sankhe, Safietou, Mohamed, Sahra Isse, Femi, Saibu, Mhalla, Salma, Hosch, Salome, Kassim, Samar Kamal, Metha, Samar, Trabelsi, Sameh, Agwa, Sara Hassan, Mwangi, Sarah Wambui, Doumbia, Seydou, Makiala-Mandanda, Sheila, Aryeetey, Sherihane, Ahmed, Shymaa S., Ahmed, Side Mohamed, Elhamoumi, Siham, Moyo, Sikhulile, Lutucuta, Silvia, Gaseitsiwe, Simani, Jalloh, Simbirie, Andriamandimby, Soa Fy, Oguntope, Sobajo, Grayo, Solène, Lekana-Douki, Sonia, Prosolek, Sophie, Ouangraoua, Soumeya, van Wyk, Stephanie, Schaffner, Stephen F., Kanyerezi, Stephen, Ahuka-Mundeke, Steve, Rudder, Steven, Pillay, Sureshnee, Nabadda, Susan, Behillil, Sylvie, Budiaki, Sylvie L., van der Werf, Sylvie, Mashe, Tapfumanei, Mohale, Thabo, Le-Viet, Thanh, Velavan, Thirumalaisamy P., Schindler, Tobias, Maponga, Tongai G., Bedford, Trevor, Anyaneji, Ugochukwu J., Chinedu, Ugwu, Ramphal, Upasana, George, Uwem E., Enouf, Vincent, Nene, Vishvanath, Gorova, Vivianne, Roshdy, Wael H., Karim, Wasim Abdul, Ampofo, William K., Preiser, Wolfgang, Choga, Wonderful T., Ahmed, Yahaya Ali, Ramphal, Yajna, Bediako, Yaw, Naidoo, Yeshnee, Butera, Yvan, de Laurent, Zaydah R., Ouma, Ahmed E. O., von Gottberg, Anne, Githinji, George, Moeti, Matshidiso, Tomori, Oyewale, Sabeti, Pardis C., Sall, Amadou A., Oyola, Samuel O., Tebeje, Yenew K., Tessema, Sofonias K., de Oliveira, Tulio, Happi, Christian, Lessells, Richard, Nkengasong, John, Wilkinson, Eduan, Shibemba, Aaron L., Obong, Abasi Ene, Fadeyi, Abayomi, Anas, Abbad, Shabaan, Abd Elazeez, Adel, Abd Monaem, Shoka, Abd Moniem Ain, Abdelhamid, W., Laraqui, Abdelilah, Laatiris, Abdelkader, Bellefquih, Abdelkrim Meziane, Faouzi, Abdellah, Abdelmoulah, F., Essabbar, Abdelomunim, Bimouhen, Abderrahmane, Hilali, Abderraouf, Abdo, I., Padane, Abdou, Sangaré, Abdoul Karim, Soumah, Abdoul Karim, Djimde, Abdoulaye, Toure, Abdoulaye, Kanteh, Abdoulie, Bashein, Abdulla, Salama, Abdullah, Lojuan, Abe, Bayih, Abebe Genetu, Negash, Abel Abera, Lissom, Abel, Abid, N., Konou, Abla A., Shama, Abo, Abosede, O., Abouelnaga, S., Ali, Abraham, Anang, Abraham Kwabena, Tesfaye, Abraham, Khan, Adam K., Tayachew, Adamu, Mihret, Adane, AlEmam, Adba Alfatih, Hawi, Adede, Adesegun, A., Desta, Adey Feleke, Ghassan, Adib, Traoré, Adjaratou, Adjiratou Aissatou, B. A., Sadji, Adodo, Egli, Adrian, Mendes, Adriano, Abera, Adugna, Candé, Adul, Alaoui, Afaf, Pedro, Afonso, Agbodzi, B., Ageez, A.M., Ayouba, Ahidjo, Alarif, Ahlam, Kayed, Ahmed E, El-Taweel, Ahmed, Elsayed, Ahmed, Gad, Ahmed F., Fakhfakh, Ahmed, Ahmed, M., Ahmed, O. S., Reggad, Ahmed, Taha, Ahmed, Vida, Ahyong, Bensalem, Aicha, Sivro, Aida, Hachid, Aissam, Ajili, F., Ajogbasile, F.V., Adegnika, Akim A., Siliadin, Akoele, Natasha, Akwii Patience, Lemtudo, Alan, Sanaa-amine, Alaoui, Alaruusi, A. M., Ouro-Medeli, Alassane, Nyunja, Albert, Rizzo, Alberto, Abdissa, Alemseged, Debela, Alemu Tike, Mancon, Alessandro, Marcello, Alessandro, Goredema, Alexander, Greninger, Alexander, Ndjolo, Alexis, Niyomwungere, Alexis, Mari, Alfredo, Mayor, Alfredo, Ali, M.A., Zumla, Ali, Ben Kahla, Alia, Grad, Alia, Kabanda, Alice, Tia, Alie, Camara, Alimou, Zumla, Alimuddin, Dieng, Alle Baba, Maiga, Almoustapha I., Sall, Amadou Alpha, Daou, Amadou, Naguib, Amal, Souiri, Amal, Zouaki, Amal, Ghita, Amalou, Mveang-Nzoghe, Amandine, Koné, Amariane, Koné, Amariane M. M., Ahouidi, Ambroise, Benyahia, Amel, Nagiub, Amel, Amer, K. E., Dorkenoo, Ameyo, Barkat, Amina, Dia, Aminata, Mbaye, Aminata, Mboup, Aminata, Thiam, Aminata Sileymane, Lahlou, Amine Idriss, Wadi, Amira Suliaman, Ehlan, Amivi, Marion, Amujal, Aziza, Amuri, Strydom, Amy, Abbad, Anass, Mulu, Andargachew, Maaroufi, Anderrahmane, Luquette, Andrea E., Shiningavamwe, Andreas, Moreira-Soto, Andres, Azman, Andrew, Bennett, Andrew J., Tarupiwa, Andrew, Latifa, Anga, Badjo, Ange, Angelov, Angel, Brisebarre, Angela, Detweiler, Angela M., Ndong, Angoune, Werno, Anja, NDiaye, Anna Julienne Selbe, Sander, Anna-Lena, Annajr, B., D'Aprile, Annamaria, van der Linden, Anne, van der Eijk, Annemiek, Erhart, Annette, Somboro, Anou M., Dagnran, Anoumou, Ahumibe, Anthony, Levasseur, Anthony, van der Linden, Antje, Dara, Antoine, Jegede-Williams, Anu, Aouni, M., Arjarquah, A., Uwituze, Arlene, Upton, Arlo, Poda, Armel, Somé, Arsène, Zongo, Arsène, Massinga, Arsenia, Asare, K.M., Katabazi, Ashaba Fred, Ferjani, Asma, Dieng, Assane, Gaye-Gaye, Astou, Atiga, N., Weldemariam, Atsbeha G., Arjaquah, Augustina, Auld, A., Ba-Diallo, Awa, ElMoussi, Awatef, Sena, Awunyo, Mohamed, Aya, Farghaly, Ayman, Ayo-Ale, B., Ayoade, F., Adegnika, Ayola Akim, More, Ayong, James, Ayorinde Babatunde, Nawfel, Azami, Diergaardt, Azaria, Okwuraiwe, Azuka Patrick, Taiwo, Babafemi O., Baboo, S. B., Bahadoor, B. S., Bahnassy, A.A., Sanyang, Bakary, Bakry, U., Touré, Bamba Fatoumata, Iwalokun, Bamidele, Banda, R., Bane, S., Johnson, Bankole, Cisse, Barada, Murwira, Barbra, Munnink, Bas Oude, Batra, R., Dhaala, Beatrice, Lamiae, Belayachi, Belkhir, A.B., Ben Ayed, I., Morton, Ben, Moussa, Ben, Wulf, Ben, Ndeboko, Bénédicte, Rachid, Benhida, Lindsey, Benjamiin B., Foulkes, Benjamin H., Hounkpatin, Benjamin, Selekon, Benjamin, Bensaid, M., Mpairwe, Bernard, Bagaya, Bernard Ssentalo, Vanmechelen, Bert, Lell, Bertrand, Mutai, Beth, Adnew, Bethlehem, Makamure, Beuty, Bighignoli, B., Ndiaye, Birahim Piere, Adhikari, Bishwo N., Bitrou, S.M., Akenji, Blaise MBoringong, Shobayo, Bode, Zuze, Boitumelo, Nlavo, Bonifacio Manguire, Belfquih, Bouchra, Boujemla, Bouchra, Yatassaye, Bouna, Aymane, Bouzidi, Andika, Brian, Yemi, Bright K., Kleinhans, Bronwyn, Galvao, Bruna, Embaló, Bubacar Delgado Pinto, Manene, Bulelani, Pascal, Butoyi, Capel, Camille, Anu, Campbell, Tchibozo, Carine, Madeira, Carla, Cortes, Carlos, Elisabeth, Carniel, Kifude, Carol, Tayimetha, Carolle Yanique, Arnold, Catherine E., Okoi, Catherine, Waruhiu, Cecilia, Godwe, Celestin, Obiekea, Celestina, Nkenfou, Celine, Chabuka, L. B., Nejjari, Chakib, Chambaro, H., Chanda, D., Changula, K., Touzani, Charifa Drissi, Kayuki, Charles, Nyagupe, Charles, Ssuuna, Charles, Hicham, Charoute, Watters, Chaselynn M., Chawech, H., Sokhna, Cheikh, Mohamed, Chenaoui, Nwuba, Chiamaka, Chilufya, C., Chukwu, Chimaobi, Anyika, Chinyere, Chipimo, P.J., Chitanga, S., Chitenje, M., Chiwaula, M. J., Taha, Chouati, Mansell, Chris, Butel, Christelle, Devaux, Christian A., Drosten, Christian, Ranaivoson, Christian, Utpatel, Christian, Malabat, Christophe, Chtourou, A., Chukwu, G., Daubenberger, Claudia, Kakai, Clement G., Masakwe, Clement, Rafai, Clotaire Donatien, Chenwi, Collins, Misita, Collins M., Muli, Collins, GeurtsvanKessel, Corine H., Maufrais, Corinne, Mbegnan, Coulibaly, Crawford, M., Tato, Cristina M., Yiaba, Cyrus, D'Amore, N., Damilari, Dabiri, Ramadan, Dalia, Damena, D., Ouso, Daniel, Pisanelli, Daniela, Licastro, Danilo, Hammer, David, Nieuwenhuijse, David, Kateete, David Patrick, Wilkinson, David, Mouangala, Davy Leger, Alemayehu, Dawit Hailu, Dawood, R.M., De Sanctis, R., Mettle, Deborah N. A., Koita, Demba, Lodiongo, Dennis Kenyi, Laryea, Dennis, Wandera, Dennis N., Leta, Dereje, Noureddine, Dersi, Takou, Desire, Tefera, Dessalegn Abeje, Batra, Dhwani, Ndongo, Dia, Diab, A., Diagne, Diabou, Mabika, Diane A., Bamourou, Diané, Samaté, Dianke, Diarra, B., Raoult, Didier, Mutangana, Dieudonne, Nyepetsi, Dineo Emang Tshiamo. Gape, Ada, Diosdado Odjama Nseng, Salah, Djimabi, Cedola, Donatella, Harding, Doris, Yeboah-Manu, Dorothy, Ange, Dossou, Djomsi, Dowbiss Meta, Drinkovic, Dragana, Draper, C., Sahr, Dumbuya Foday, Odewale, Ebenezer, Sedjro, Eclou, Armand, Edang-Minko, Kigozi, Edgar, Koskei, Edith, Nkwembe, Edith, de Oliveira Filho, Edmilson F., Maria da Costa, Edmira, Kiritu, Edward, Lim, Efrem S., Ozer, Egon A., Egyir, B., Abuelenein, Ehab Abdelkader, Ngole, Eitel Mpoudi, Aissam, El Aliani, Zahra, El Ansari Fatima, Adil, El Hamouchi, Abdelmjid, El Oualid, El-Shaqnqery, H., El-Zayat, M., Abualas, Elamin, Hicham, Elannaz, Elargoubi, A., Kidane, Eleni, Rizgalla, Elham, Elhoseny, M.M., Elhosieny, F.W., Carniel, Elisabeth, Nyakarungu, Elizabeth, Elkhateeb, S.M., Benaissa, Elmostafa, El Fahime, Elmostafa, Elouanass, M., Elsissy, M.H., Mbongo-Nkama, Elvyre, Latif, Elwaleed M. Elamin Sara A.I, Edu, Emame, Orsini, Emanuele, Skarwan, Emilio, Stefanov, Emily K., Nasinghe, Emmanuel, Nepolo, Emmanuel, Ogunbayo, Emmanuel, Munger, Emmanuelle, Permal, Emmanuelle, Gaies, Emna, Ennibi, H., Khalid, Ennibi, Kotey, Erasmus, Smit, Erasmus, Lelo, Eric A., Adu, Eric, Delaporte, Eric, Katagirya, Eric, Kezakarayagwa, Eric, Muthanje, Eric, Magalhães, Erica Luis Maria, Asiedu, Ernest, Livo, Esemu, Umumararungu, Esperance, Chitechi, Esther, Omuseni, Esther, Alain, Etoundi Mballa, Quansah, Evelyn Bonney, Bonney, Evelyn Y., Ezzelarab, M.H., Cassama, Faatu, Niama, Fabien Roch, Arena, Fabio, Faggioni, G., Fahsbender, E., Sigei, Faith, Abdellah, Faouzi, Jouali, Farah, Farawyla, H., Hilali, Farida, Chgouri, Fatima, El Falaki, Fatima, El ansari, Fatima Zahra, Ebied, Fatma, Bssaibis, Fatna, Al Onifade, Fattah, Ousmane, Faye, Khardine, Fayez Ahmed, Khardine, Fayez, Fedorov, A.V., Alemu, Fekadu, Jamal, Fekkak, Sun, Fengming, Doudou, Fetouma, Fikry, A.E., Fillo, S., Bracchitta, Fiorenza, Kaboré, Firmin, Fki-berrajah, L., Donati, Flora, Fenollar, Florence, Sorie, Foday Sahr Samuel, Folarino, O., Folorunsho, Francine, Kabatesi, Francisca, Muyembe-Mawete, Francisco, Malagon, François, Kiemdé, Franklin, Asiedu-Bekoe, Franklyn Egbe, Nkongho, Frédéric, Lemoine, Frederick, Tei-Maya, Freitas, R. H., Fuh-Neba, T., Gaaloul, I., Kabamba, Gabriel, Gutema, Gadissa, Emna, Gaies, Gadzama, Galadima, Mahmoud, Galal, Ouangole, Garba, Gargouri, S., Garry, R., McAuliffe, Gary, Kimita, Gathii, Manouana, Gédéon Prince, Tesfaye, Gelanew, Awinda, George, Kyei, George B., Michuki, George, Ondo, Georgelin Nguema, van Rooyen, Gerhard, Marais, Gert, Abichu, Getachew, Beyene, Getachew Tesfaye, Tollera, Getachew, Hailu, Getnet, Hamza, Ghamaz, Kayali, Ghazi, El Amin, Ghizlane, Mhlanga, Gibson, Kibet, Gilbert, Hounkanrin, Gildas, Giordani, F., Teka, Gizaw, Masete, Godfrey, Goldstone, R., Gomaa, C., Mokhtar, Gomaa, Lo, Gora, Gosnell, B. I., Gottberg, A., Belournou, Grace Angong, Oni, Grace, Vincent, Grace, Wani, Gregory, Barreh, Guedi Ali, Garcia, Guillermo, Deng, Guohong, Guseva, N. 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المصدر:	Science (New York, N.Y.), Vol 378, Issue 6615.
بيانات النشر:	Science
سنة النشر:	2022
المجموعة:	LSTM Online Archive (Liverpool School of Tropical Medicine)
مصطلحات موضوعية:	QU 460 Genomics. Proteomics, WC 506 COVID-19
الوصف:	INTRODUCTION Investment in Africa over the past year with regard to severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) sequencing has led to a massive increase in the number of sequences, which, to date, exceeds 100,000 sequences generated to track the pandemic on the continent. These sequences have profoundly affected how public health officials in Africa have navigated the COVID-19 pandemic. RATIONALE We demonstrate how the first 100,000 SARS-CoV-2 sequences from Africa have helped monitor the epidemic on the continent, how genomic surveillance expanded over the course of the pandemic, and how we adapted our sequencing methods to deal with an evolving virus. Finally, we also examine how viral lineages have spread across the continent in a phylogeographic framework to gain insights into the underlying temporal and spatial transmission dynamics for several variants of concern (VOCs). RESULTS Our results indicate that the number of countries in Africa that can sequence the virus within their own borders is growing and that this is coupled with a shorter turnaround time from the time of sampling to sequence submission. Ongoing evolution necessitated the continual updating of primer sets, and, as a result, eight primer sets were designed in tandem with viral evolution and used to ensure effective sequencing of the virus. The pandemic unfolded through multiple waves of infection that were each driven by distinct genetic lineages, with B.1-like ancestral strains associated with the first pandemic wave of infections in 2020. Successive waves on the continent were fueled by different VOCs, with Alpha and Beta cocirculating in distinct spatial patterns during the second wave and Delta and Omicron affecting the whole continent during the third and fourth waves, respectively. Phylogeographic reconstruction points toward distinct differences in viral importation and exportation patterns associated with the Alpha, Beta, Delta, and Omicron variants and subvariants, when considering both Africa versus the rest of ...
نوع الوثيقة:	article in journal/newspaper
وصف الملف:	text
اللغة:	English
العلاقة:	https://archive.lstmed.ac.uk/21319/1/science.abq5358.pdfTest; Tegally, Houriiyah, San, James E., Cotten, Matthew, Moir, Monika, Tegomoh, Bryan, Mboowa, Gerald, Martin, Darren P., Baxter, Cheryl, Lambisia, Arnold W., Diallo, Amadou, Amoako, Daniel G., Diagne, Moussa M., Sisay, Abay, Zekri, Abdel-Rahman N., Gueye, Abdou Salam, Sangare, Abdoul K., Ouedraogo, Abdoul-Salam, Sow, Abdourahmane, Musa, Abdualmoniem O., Sesay, Abdul K., Abias, Abe G., Elzagheid, Adam I., Lagare, Adamou, Kemi, Adedotun-Sulaiman, Abar, Aden Elmi, Johnson, Adeniji A., Fowotade, Adeola, Oluwapelumi, Adeyemi O., Amuri, Adrienne A., Juru, Agnes, Kandeil, Ahmed, Mostafa, Ahmed, Rebai, Ahmed, Sayed, Ahmed, Kazeem, Akano, Balde, Aladje, Christoffels, Alan, Trotter, Alexander J., Campbell, Allan, Keita, Alpha K., Kone, Amadou, Bouzid, Amal, Souissi, Amal, Agweyu, Ambrose, Naguib, Amel, Gutierrez, Ana V., Nkeshimana, Anatole, Page, Andrew J., Yadouleton, Anges, Vinze, Anika, Happi, Anise N., Chouikha, Anissa, Iranzadeh, Arash, Maharaj, Arisha, Batchi-Bouyou, Armel L., Ismail, Arshad, Sylverken, Augustina A., Goba, Augustine, Femi, Ayoade, Sijuwola, Ayotunde E., Marycelin, Baba, Salako, Babatunde L., Oderinde, Bamidele S., Bolajoko, Bankole, Diarra, Bassirou, Herring, Belinda L., Tsofa, Benjamin, Lekana-Douki, Bernard, Mvula, Bernard, Njanpop-Lafourcade, Berthe-Marie, Marondera, Blessing T., Khaireh, Bouh Abdi, Kouriba, Bourema, Adu, Bright, Pool, Brigitte, McInnis, Bronwyn, Brook, Cara, Williamson, Carolyn, Nduwimana, Cassien, Anscombe, Catherine, Pratt, Catherine B., Scheepers, Cathrine, Akoua-Koffi, Chantal G., Agoti, Charles N., Mapanguy, Chastel M., Loucoubar, Cheikh, Onwuamah, Chika K., Ihekweazu, Chikwe, Malaka, Christian N., Peyrefitte, Christophe, Grace, Chukwa, Omoruyi, Chukwuma E., Rafaï, Clotaire D., Morang’a, Collins M., Erameh, Cyril, Lule, Daniel B., Bridges, Daniel J., Mukadi-Bamuleka, Daniel, Park, Danny, Rasmussen, David A., Baker, David, Nokes, David J., Ssemwanga, Deogratius, Tshiabuila, Derek, Amuzu, Dominic S. 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DOI:	10.1126/science.abq5358
الإتاحة:	https://archive.lstmed.ac.uk/21319Test/ https://archive.lstmed.ac.uk/21319/1/science.abq5358.pdfTest
حقوق:	cc_by_4
رقم الانضمام:	edsbas.B72A625C
قاعدة البيانات:	BASE

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الوصف
DOI:	10.1126/science.abq5358