المؤلفون: Ravin Poudel, Lidimarie Trujillo Rodriguez, Christopher R Reisch, Adam R Rivers

المصدر: Gigascience

مصطلحات موضوعية: Gene Editing, Genome, Technical Note, Health Informatics, CRISPR-Cas Systems, Software, RNA, Guide, Kinetoplastida, Computer Science Applications

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5d712bab0cf2682be066f97224532523Test
https://doi.org/10.1093Test/gigascience/giac007

المؤلفون: Z. Al-Ars, T. Ahmad, Harm Peter Hofstee

المصدر: GigaScience

مصطلحات موضوعية: Big Data, Computer science, AcademicSubjects/SCI02254, Big data, BWA-MEM, Health Informatics, computer.software_genre, Workflow, Scheduling (computing), Spark (mathematics), Technical Note, sort, computer.programming_language, Apache Spark, business.industry, MarkDuplicate, High-Throughput Nucleotide Sequencing, Python (programming language), Computer Science Applications, Computer architecture, whole-genome sequencing, Scripting language, Scalability, AcademicSubjects/SCI00960, DeepVariant, Apache Arrow, business, computer, Algorithms, Software, sorting

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8874886dbc669fb3db009aa15132ad1eTest
https://doi.org/10.1093Test/gigascience/giab057

المؤلفون: Sven Heins, Hannes Wartmann, Stefan Bonn, Karin Kloiber

المصدر: GigaScience

مصطلحات موضوعية: Domain adaptation, domain adaptation, Computer science, AcademicSubjects/SCI02254, Health Informatics, Reuse, RNA-seq metadata, Consistency (database systems), Annotation, Bias, Technical Note, Metadata annotation, Invariant (computer science), automated annotation, Metadata, Information retrieval, Sequence Analysis, RNA, business.industry, Deep learning, Molecular Sequence Annotation, bias invariance, deep learning, computational biology, bioinformatics, Computer Science Applications, data reusability, machine learning, AcademicSubjects/SCI00960, RNA, Artificial intelligence, business, Algorithms

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9963041259cd0bcab79aabf8346b6b0eTest
https://doi.org/10.1093Test/gigascience/giab064

المؤلفون: Medhat Mahmoud, Todd J. Treangen, Fritz J. Sedlazeck, Viginesh Vaibhav Muraliraman, Yilei Fu

المصدر: GigaScience

مصطلحات موضوعية: read mapping, Computer science, AcademicSubjects/SCI02254, Pipeline (computing), Health Informatics, Context (language use), long-read, Structural variation, Nanopores, Technical Note, Humans, Genome, Human, gap penalty, structural variation, High-Throughput Nucleotide Sequencing, Gap penalty, Genomics, Sequence Analysis, DNA, Computer Science Applications, Vulcan, AcademicSubjects/SCI00960, Nanopore sequencing, Heuristics, Precision and recall, Algorithm, Software

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6ba73792395e518cef86b8bfe2a3106dTest
https://doi.org/10.1093Test/gigascience/giab063

المؤلفون: Jonas Cordes, Marven Hinze, Ivo Wolf, Sandy Engelhardt, Christian Marsching, Carsten Hopf, Thomas Enzlein

المصدر: GigaScience

مصطلحات موضوعية: 0301 basic medicine, Computer science, AcademicSubjects/SCI02254, ComputingMethodologies_IMAGEPROCESSINGANDCOMPUTERVISION, Image registration, Health Informatics, Image processing, mass spectrometry imaging, multi-modal, Iterative reconstruction, 01 natural sciences, Mass Spectrometry, Workflow, Mice, 03 medical and health sciences, Imaging, Three-Dimensional, Technical Note, Image Processing, Computer-Assisted, Animals, three-dimensional, Computer vision, Interactive visualization, business.industry, 010401 analytical chemistry, 3D reconstruction, Image segmentation, image reconstruction, 0104 chemical sciences, Computer Science Applications, Visualization, image registration, 030104 developmental biology, Feature (computer vision), AcademicSubjects/SCI00960, Artificial intelligence, business, interactive visualization, Software

وصف الملف: Print

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ab7a6440414bdd73e3c09cdeb8ff2154Test
https://doi.org/10.1093Test/gigascience/giab049

المؤلفون: Oskar Hickl, Patrick May, Francesco Delogu, Pedro Queirós, Paul Wilmes

المساهمون: Luxembourg Centre for Systems Biomedicine (LCSB): Bioinformatics Core (R. Schneider Group) [research center], Luxembourg Centre for Systems Biomedicine (LCSB): Eco-Systems Biology (Wilmes Group) [research center]

المصدر: GigaScience

مصطلحات موضوعية: Environmental sciences & ecology [F08] [Life sciences], Microbiologie [F11] [Sciences du vivant], Consensus, Computer science, AcademicSubjects/SCI02254, Big data, Health Informatics, Context (language use), Multidisciplinary, general & others [F99] [Life sciences], Consensus-driven protein annotation, Genome, Multidisciplinaire, généralités & autres [F99] [Sciences du vivant], 03 medical and health sciences, Annotation, 0302 clinical medicine, Protein Annotation, Technical Note, Data Mining, Microbiology [F11] [Life sciences], HMM, Mantis, 030304 developmental biology, 0303 health sciences, Information retrieval, biology, business.industry, A protein, Reproducibility of Results, homology, Molecular Sequence Annotation, bioinformatics, Genome project, Omics, biology.organism_classification, Computer Science Applications, Sciences de l'environnement & écologie [F08] [Sciences du vivant], Identification (information), Reference data, AcademicSubjects/SCI00960, Metagenome, Function predictin, protein function annotation, business, Software, 030217 neurology & neurosurgery, Genome annotation

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7d1cefbc0da3a685c5d71800a7ca9484Test
https://doi.org/10.1093Test/gigascience/giab042

المؤلفون: Lars Wienbrandt, David Ellinghaus, Jan Christian Kässens

المصدر: GigaScience
Kaessens, J C, Wienbrandt, L & Ellinghaus, D 2021, ' BIGwas : Single-command quality control and association testing for multi-cohort and biobank-scale GWAS/PheWAS data ', GigaScience, vol. 10, no. 6, 047 . https://doi.org/10.1093Test/gigascience/giab047

مصطلحات موضوعية: Quality Control, Computer science, AcademicSubjects/SCI02254, Population, Health Informatics, computer.software_genre, Polymorphism, Single Nucleotide, 03 medical and health sciences, 0302 clinical medicine, Resource (project management), Software, Technical Note, Humans, GWAS, quality control, education, scalability, Biological Specimen Banks, 030304 developmental biology, 0303 health sciences, education.field_of_study, Genome, Singularity, business.industry, PheWAS, pipeline, association testing, Biobank, Pipeline (software), Computer Science Applications, GENOME, biobank, Nextflow, Phenotype, Workflow, Scalability, Container (abstract data type), MAP, AcademicSubjects/SCI00960, Data mining, business, computer, 030217 neurology & neurosurgery, PACKAGE, Genome-Wide Association Study

وصف الملف: application/pdf

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::032df6c0d73554545b9e493689fe10e3Test
https://doi.org/10.1093Test/gigascience/giab047

المؤلفون: Milovan Šuvakov, Arijit Panda, Colin Diesh, Ian Holmes, Alexej Abyzov

المصدر: GigaScience

مصطلحات موضوعية: copy number alternations, Source code, DNA Copy Number Variations, media_common.quotation_subject, AcademicSubjects/SCI02254, Health Informatics, Cloud computing, Biology, computer.software_genre, Technical Note, Copy-number variation, MIT License, Alleles, media_common, computer.programming_language, Whole genome sequencing, Whole Genome Sequencing, business.industry, High-Throughput Nucleotide Sequencing, Genomics, Sequence Analysis, DNA, Python (programming language), Computer Science Applications, Visualization, copy number variations, whole-genome sequencing, AcademicSubjects/SCI00960, Data mining, business, computer, Software, Personal genomics, Python

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5bf4a6fc1c99441304d03bf1dc73f63dTest
https://pubmed.ncbi.nlm.nih.gov/34817058Test

المؤلفون: Michael, Uhl, Van Dinh, Tran, Florian, Heyl, Rolf, Backofen

المصدر: GigaScience

مصطلحات موضوعية: Binding Sites, CLIP-seq, RBP binding site prediction, AcademicSubjects/SCI02254, RNA-Binding Proteins, deep learning, eCLIP, Technical Note, RNA, AcademicSubjects/SCI00960, recurrent neural networks, Neural Networks, Computer, visualization, Protein Binding

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=pmid________::62cb5a59c7d9e69ab87b74d4bcf8ac5dTest
https://pubmed.ncbi.nlm.nih.gov/34406415Test

المؤلفون: Daniel Min, Joshua D. Neufeld, Andrew C. Doxey

المصدر: GigaScience

مصطلحات موضوعية: Computer science, AcademicSubjects/SCI02254, interactive pipeline, 0206 medical engineering, Health Informatics, 02 engineering and technology, microbial ecology, Automation, 03 medical and health sciences, Data visualization, Technical Note, Phylogeny, 030304 developmental biology, 0303 health sciences, Information retrieval, QIIME2, business.industry, End user, Data Visualization, High-Throughput Nucleotide Sequencing, Usability, Pipeline (software), Computer Science Applications, Metadata, 16S rRNA genes, AcademicSubjects/SCI00960, Line (text file), User interface, SSU rRNA, business, Software, 020602 bioinformatics

الوصول الحر: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c21b6c6cd270073fbba0e50ca35ea4cfTest
https://doi.org/10.1093Test/gigascience/giab006